Dataset Viewer (First 5GB)
Auto-converted to Parquet Duplicate
query_name
string
source_chrom
string
source_start
int64
source_end
int64
region_label
string
species
string
alignment_name
string
assembly
string
taxonomy_id
int64
family
string
clade
string
phylogenetic_rank
int64
alignment_source
string
t_chrom
string
t_start
int64
t_end
int64
t_strand
string
t_src_size
int64
pre_resize_t_start
int64
pre_resize_t_end
int64
fragment_count
int64
aligned_bases
int64
sequence
string
augmentation
string
fa1_utr3_11_000115169599_000115169854
chr11
115,169,599
115,169,854
utr3
Eschrichtius robustus
Eschrichtius_robustus
GCA_004363415.1
9,764
Eschrichtiidae
mammals
1
zoonomia_cactus
EscRob_flattened_line_11311
42,654
42,909
+
117,402
42,781
42,782
1
1
CTTTTTGGTTTGTTTTCTCTGTGGTTGTGTATTTCATCATTTAAACTTGCAACGGATGCTGGCAGGCTGGAGTCTAGCTAATCCACAAAAGCTGTTTGCCCAGACACAGCAGCCCTGATTAAAAAGTATTGCTATGGAAGGGAGCCTTCTGTACTAATCAGTCTCTGTTAGCTAGTGACGAAATTACTATCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCTCTCTCTAGGCCTGTTTT
-
fa1_utr3_13_000071439097_000071439352
chr13
71,439,097
71,439,352
utr3
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_60
207,089
207,344
+
1,123,500
207,216
207,217
1
1
TGTTTTCACTTTTGTGCAGATAACTGGAAGTAAAGCTGCAAACAGTGCTTATTACACACTGAAGTTACTTTCTCTTTGTTTTTACTAATCTGGAGTTACACCTTTCAAGACTGATTTTATGAATCAGTACAGTCGCTGTACATTTTATGATTTTGCTGTCATCTTAAAATTTTATGATCATAACATTATTTATTACCATGAATAGCAAAATCCTAAATGTCCAAGAAAACTAGCTTAAACATGTTTAAAGATAGT
-
fa1_utr3_11_000043343014_000043343269
chr11
43,343,014
43,343,269
utr3
Daubentonia madagascariensis
Daubentonia_madagascariensis
GCA_004027145.1
31,869
Daubentoniidae
mammals
1
zoonomia_cactus
ctg17
666,993
667,248
-
31,384,267
667,120
667,121
1
1
AAATACTTACCATCTTTCTTAAAATGTAGAAGTGACATTACATTTTTAGGAAGAGGTAAGTTGCTTTGCTCTGCTTACTTAACTCTTTTCCATATATTGTGATATAAACTTTTGAATATGGGATCTTACTATTTGAATAGAAATGTGTATGTATAATATACATACATACATAAGCATATATGTGTGTGTGTATATATATATGCATGCTGTGAAACTTGACTACACAACATAAATCATTTTTCAAAATTCTAGGAA
+
fa1_utr3_1_000207072348_000207072603
chr1
207,072,348
207,072,603
utr3
Macroglossus sobrinus
Macroglossus_sobrinus
GCA_004027375.1
326,083
Pteropodidae
mammals
1
zoonomia_cactus
MacSob_scaffold_7448
77,070
77,325
+
113,658
77,197
77,198
1
1
AAACACCCAACCCGTCCACTCGCCCCTGGGCAGGGAGATGTTTCACACTGCAGAATAGCTAAGGCTGGTCTAGAAACACACGGCCTCACACTCTGTGTTAAGACTCATGATGGGGTGTCAGGGGTAGGGATTCGAAGTTAAATGATTCCTTGGTGATTAGTGATAAGGGCAGGAGGCCAGGACTGGAGGGAGACACACGGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTGTTCGGCCCCTTCTTGCATG
-
fa1_utr3_10_000000811524_000000811779
chr10
811,524
811,779
utr3
Odocoileus virginianus
Odocoileus_virginianus
GCA_002102435.1
9,874
Cervidae
mammals
1
zoonomia_cactus
KZ104774.1
1,509,954
1,510,209
-
4,716,471
1,510,081
1,510,082
1
1
tttaagtatcCTAAGCAGCAgacattaaaataagaatatttcctGCTAAATGTAACCATACAGTTTATTCcacaaaatgttatttaataagactgagggtttttttttaagagattatttCCATCCAATATTTAAagacttgaattttatttaaacttgaaAATGACTTTGCCTTAACTTTTGTATAGGACAGTTTAAGAGTTCTGAGATGGGCCTGGGTTGGCATGAGTGGGGTCTGCTGTCACGGTGTCACTG
-
fa1_utr3_8_000080968301_000080968556
chr8
80,968,301
80,968,556
utr3
Erinaceus europaeus
Erinaceus_europaeus
GCF_000296755.1
9,365
Erinaceidae
mammals
1
zoonomia_cactus
JH835406.1
3,647,154
3,647,409
-
5,146,105
3,647,281
3,647,282
1
1
acacccccattttgtatatggggaaactgaggcacagagaaattaagtcatttgttctgggtcacactgtaaagtcaatggtggaacagggactgcagagtggtgagtttgcagcttcaaaaccaatgcttctctgtagactaaagttgtcccctctgAGAATTCAACACCTCAACTCACTTTTCCATGAAATAAAAATTGtgcatttttttcctctcataaaAATTGTTGAAATACTACAGGCAATATTTGAAC
+
fa1_utr3_13_000042607279_000042607534
chr13
42,607,279
42,607,534
utr3
Spilogale gracilis
Spilogale_gracilis
GCA_004023965.1
30,551
Mephitidae
mammals
1
zoonomia_cactus
SpiGra_flattened_line_20494
59,043
59,298
-
72,951
59,170
59,171
1
1
ACTAGTTAAATATGTCTGTACATTTAAAACATTAAATATGTCGACAGCAAGACATTTTTAAATATTTTGAATCAAATACTATGGCACAAATATAATTTACAATACTTTGCACAGAAAACATTACATCTGACATATAACTTTAGATATTATATAAAAATACATATATTTTCTTTCCTCATTAGAAAAAGTATTTATTTGCAGGTCCCAGCATGATGTAACCATTCAAAGGAACTTAACTTTTCGGCTGGTCATCCG
-
fa1_utr3_17_000059400495_000059400750
chr17
59,400,495
59,400,750
utr3
Pithecia pithecia
Pithecia_pithecia
GCA_004026645.1
43,777
Pitheciidae
mammals
1
zoonomia_cactus
tarseq_100
3,288,996
3,289,251
+
7,367,152
3,289,123
3,289,124
1
1
CGCACACACACGCACAATTGAAAACATGATTCCGATTTGTTGAAAATTCTTCCAATAGGAAGAATCACTGTAAGTTGTTACTACTAAATTAACTTGGTTTCATTTATTTTCTTTTCTAGCCAATACTGGTGCAAGAAAATATTTCAGTTCTCAACCTCTGGAACTGCAGAGTCTGTTCCACTGCGGAAAAAATGCAGAGAGGCATTGCTTTAAAGCCTTGATCCAGATGAAAGTGATAGAGACCTTAAAAAAAAA
-
fa1_utr3_20_000063744119_000063744374
chr20
63,744,119
63,744,374
utr3
Zalophus californianus
Zalophus_californianus
GCA_004024565.1
9,704
Otariidae
mammals
1
zoonomia_cactus
ZalCal_flattened_line_4236
2,892
3,147
-
224,444
3,019
3,020
1
1
AGCTCTGGATCCTGACCAGGTTGTATATTTGGACTCTGGGTTTTGGGAAACAGTCATAACACTGCCAGGACTGAATAGGGACCTCGACTCAAGAGACACGGCTACTCCTTCCAACTTTGCACATCTTCCTTTTTAAAAAAGAAACTCTGAGAAAAGGCAAAAACTGGAACTCTTTGCAATATGATGAAAGATAATCTTATTTTCGCTCATTATGTGACGTGCGACGCTTAAGAAAGCCATACTTACTGGTTTTTA
-
fa1_utr3_17_000039534109_000039534364
chr17
39,534,109
39,534,364
utr3
Choloepus hoffmanni
Choloepus_hoffmanni
GCA_000164785.2
9,358
Megalonychidae
mammals
1
zoonomia_cactus
KN195032.1
1,482,014
1,482,269
-
1,567,532
1,482,141
1,482,142
1
1
GCTTGGCCCAGTTTCCTTAGTATTTTCTTCAGCTGCCCATAGGAACAATTAGGATTTCAAAACAAGAACGGATCTATATGTTTAAAGGAAAGCAGTTAGCACAAATTTGTAAGTAGGACTTCTATTAGCTTATGCCATAGACATCACCCAaccttatgtgtgtgtgtgtgtatatatatatatatatataatatgcatatatagTTACAGTGCTAAAATGATTACCAGCAGGTTTTGAGAGAGAATGCTGCATCA
+
fa1_utr3_2_000044944993_000044945248
chr2
44,944,993
44,945,248
utr3
Microtus ochrogaster
Microtus_ochrogaster
GCF_000317375.1
79,684
Cricetidae
mammals
1
zoonomia_cactus
CM001681.1
8,599,466
8,599,721
+
62,639,585
8,599,593
8,599,594
1
1
ccaccaccaccaccacggccaccccaAAGGACCGCGACGCCAACAGACAGTCACAAACGCTGATCTTGCGGGCAGAAAACATAAAAGAGGTGACAATTGTATACTTTCCAGGACAAGCACGGTTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGACGATTTATTTGTATCTGGGAAAATATTCTCTCTAGTTTAAAGTGATTTAAGGAGTCGACCATACAAAAACCACCACCGCCGAGACAAGA
+
fa1_utr3_11_000061788296_000061788551
chr11
61,788,296
61,788,551
utr3
Odobenus rosmarus
Odobenus_rosmarus
GCF_000321225.1
9,707
Odobenidae
mammals
1
zoonomia_cactus
KB229346.1
539,700
539,955
-
1,502,353
539,827
539,828
1
1
ccgccaaaaGCCTGCATGTGCATAGAGCGCCCCTCCCTCCCAGTTAACTCCCAGTTCCTGTCCCTGAGTGCTGACTCATATTTATCGTGTACCAACTCTGACTctggagtgggcagagggaagcCGCCCTGGGCCTGCTTGCTTCCTCTCCCTGTTCTTTCCTTCTgaagtaaatatacatatataaataaatgtaaaaacatggCTTTGTATCTGACCTTGCCTCCCCATCTCTTCTTGAGACTGTTGTGGTAG
+
fa1_utr3_X_000152166341_000152166596
chrX
152,166,341
152,166,596
utr3
Microcebus murinus
Microcebus_murinus
GCA_000165445.3
30,608
Cheirogaleidae
mammals
1
zoonomia_cactus
CM007693.1
73,072,609
73,072,864
+
144,923,918
73,072,736
73,072,737
1
1
CCTTAAGACAGTCATTAACAACCGCGCCTCCCCCCCCCATTCCCACATATCCACAAGACTACACTCTTCTAGTCATGAATTTACCTACAGACACAATCTTAGGAATAATGGGACTGGCATGCATTATCCCAGCAATGGCAAGGAAGCAGGGGATGAGGAGAGGATGGATGAAAAGGCAATCAGCAGCTAATGATACACCCCTTACGAGCTTTGTCCAGGGGTGGGCAGGAAGAATCTGCTTGTGGTGCCATCTGT
+
fa1_utr3_10_000000254367_000000254622
chr10
254,367
254,622
utr3
Nycticebus coucang
Nycticebus_coucang
GCA_004027815.1
9,470
Lorisidae
mammals
1
zoonomia_cactus
k141_771232
31,824
32,079
-
35,013
31,951
31,952
1
1
ACATTTATTAACCAATGTTAACACATTAAATGAATCTATATATTGCTAGTCAGAGCAGCTTACAAAATGCCAGAATGCATCATAGAACTGGACAGCCACAATGAGTACGTACAATGTGCATAGTGGCTAAGCTCAACACCTGGATATAGCTTTATGATTTGCAGGAAATTTTTAATAATGATTCCTAAAACAATCAATTGTAGTTTTACCTAAAACTTTTACAAAACCAGGCCACAATCTCTTTTTTTAATTTTG
-
fa1_utr3_7_000102251067_000102251322
chr7
102,251,067
102,251,322
utr3
Lemur catta
Lemur_catta
GCA_004024665.1
9,447
Lemuridae
mammals
1
zoonomia_cactus
scaffold_22
8,857,676
8,857,931
-
35,902,736
8,857,803
8,857,804
1
1
GCAGTATTGGGTATAATTTACAAGATGTAGTTGTCATACTGTATATTACTGATTGAAAACTTTTTGACCGTATTGTGTATCATTGAAACCTTTGTCTTAGGTCAACATCTTTGGATGACATTTTTAATGGTGCATTCATTATTTCTTAAGTTTAATTAATATTACTTTTTTTGATTTGGGGGGGTGGGAGGGAGTTATAATTTTAAAGGTATGCTCCCGCTATTACACCTCAGTGTGCTTGTTATTAATTAACTT
+
fa1_utr3_11_000015969756_000015970011
chr11
15,969,756
15,970,011
utr3
Capromys pilorides
Capromys_pilorides
GCA_004027915.1
34,842
Capromyidae
mammals
1
zoonomia_cactus
CapPil_scaffold_80334
4,471
4,726
+
10,766
4,598
4,599
1
1
TTTGTTTTAGCTCCAGCTCTGCCTCAGTACTGGGGTTCGATAACTTGTAGCCATGTTCTTAAAAATGAAAGGCTATTCAGGAACCACCTGATTGTAAACACCTCTTCTATTGGCACAGATAGTAATGCTGTATTTGAATCTAAATTTTGTGCATACGCAGTTTATTTTATTTATTAGCCAAGTTTGGCTCTAAATATCCTTGGAAATTAAGAATGACAATCATAGAGATCACTTCATTTTTGTTTTCAGTGGGGC
-
fa1_utr3_1_000036340367_000036340622
chr1
36,340,367
36,340,622
utr3
Chelonia mydas
cheMyd1
CheMyd_1.0/cheMyd1
8,469
Cheloniidae
reptiles
3
ucsc_multiz100way
KB530910
2,545,693
2,545,948
-
9,253,364
2,545,820
2,545,821
1
1
ACTGCTTCActatgtagctccactgaaatcagatgGTTTCTTTGGTTACCACAACTAGGAGAGAGACCATTACATCACAGCTTATTCCTGTGAGTGCTGCGGGGCTCCAAGCTACGGCTGGGAACAGTGTGTGGTCAGGTCTAGGGGAAAGACCGCATTTGAAAAGCAAAACTGGCTTCTGGGTTAATCAGAAGCCTGGATCGGGCAGCGTAGGCCACGGGATCTCTGGTGAGAACAGTTCTCTGGCAAGACAGG
+
fa1_utr3_7_000155775196_000155775451
chr7
155,775,196
155,775,451
utr3
Catagonus wagneri
Catagonus_wagneri
GCA_004024745.1
51,154
Tayassuidae
mammals
1
zoonomia_cactus
CatWag_scaffold_44803
19,321
19,576
-
25,656
19,448
19,449
1
1
AAGATAAGCGCAACCATTATCAAATGTTCTCTGCTGCGGAAAATGCTGAGGCTGTGACGGCAGCGTCCCCCTCAGTCTGAGTCGCCGCGGCCGGCCACACACAGGGCCACGAGGAACAGTGTCTACATGCATCGTAAGCACTGGGAAAACAAAAGGAGCGAAACCGTGGTTCTCGGTGGTGACAGCGCACGTGGAGCATCTCGCGCCGGCTCCGGTCGGCCCGGCCCCGAGTTCAGCTCTTCTGGAACCGACACC
-
fa1_utr3_1_000023309147_000023309402
chr1
23,309,147
23,309,402
utr3
Ficedula albicollis
ficAlb2
FicAlb1.5/ficAlb2
59,894
Muscicapidae
birds
2
ucsc_multiz100way
chr23
2,949,119
2,949,374
-
7,944,683
2,949,246
2,949,247
1
1
attttgatcTCAAGCATCTTAGTCTAATCTAAAATAATACTTGACTAGGAATGAGAATTACAGCTTGGGTGCTGTGGCACACTAAACTAACTTCTTGCTACGGATAACACAAACATACTCTCCAGATTCTGCTTATTTCTATcttgacattttaatttgatGTTCTGCCATGATGAACAATTTGCCTTAGAATTCTCCTGCCTTATAATAAAGGCTGTTAAAAAATTTAAGACTTTATCTTTTGAGGGCATTGCT
-
fa1_utr3_16_000009118681_000009118936
chr16
9,118,681
9,118,936
utr3
Lycaon pictus
Lycaon_pictus
GCA_001887905.1
9,622
Canidae
mammals
1
zoonomia_cactus
CM007575.1
61,240,949
61,241,204
-
123,855,249
61,241,076
61,241,077
1
1
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
-
fa1_utr3_7_000140084725_000140084980
chr7
140,084,725
140,084,980
utr3
Petromus typicus
Petromus_typicus
GCA_004026965.1
10,183
Petromuridae
mammals
1
zoonomia_cactus
PetTyp_scaffold_53998
5,051
5,306
-
23,416
5,178
5,179
1
1
CACTGAATTTGTAAATTTTTAAGTAGCTTACAATGATTATTATAGGGAAGGACCAGTCACTTATTTAAAGCTACATTTAATATACATTTCAATTTCTATAAAATATTGAAAGTAAAATTGTTTTGATTTTTAAAGTATTTGTTATTATTTTGTTTGAAAATACACATACTGAAAGTTGTATCAAAAGAATAACTGATTGaatcagccaacggcaaatgttgtcgaggctacggagaagaaggaacccttctccac
-
fa1_utr3_1_000161120742_000161120997
chr1
161,120,742
161,120,997
utr3
Odobenus rosmarus
Odobenus_rosmarus
GCF_000321225.1
9,707
Odobenidae
mammals
1
zoonomia_cactus
KB229227.1
1,691,100
1,691,355
+
1,941,634
1,691,227
1,691,228
1
1
CAGGCCTGACCTCTACGGCACTCTGGGCCACCCGCTGTCTTAAGACTTTGACTTCTGGGACTTGAGACTCCCACTGTGGGCTGGCGTGGCCGGGACCTGAAGGCAGGGCCCAGGCGCAGCTCCCCTCACTTGAAGAACCTTGACTTTCTCGATGGAACACAGGCTCAGCTTCTTGGGAAAGAAGAAACTTTCACCTGAGCTCAGATTTCAGCTTCAGAAAGGTGGAATTTTATATAGTCACTGTTTATTTCATGA
+
fa1_utr3_9_000002654357_000002654612
chr9
2,654,357
2,654,612
utr3
Paradoxurus hermaphroditus
Paradoxurus_hermaphroditus
GCA_004024585.1
71,117
Viverridae
mammals
1
zoonomia_cactus
ParHer_flattened_line_48620
18,645
18,900
-
24,401
18,772
18,773
1
1
CTAGCCAAATTACAGGCTTAGTTACACAACATCAAAATCTATATCATCTAGCTCATATAGTTTGTTAGAATGCTTGGTACTACTCAGGCTGTTTACAGAAGTTTATCCTAGAGGAATAGGCACAAACTGTGGGTAAGCTGCTTGGTTTAATTGTTTTAGCACTTGAAAAAAAATGTACAGTAGTTTGAACACTCAGTCTTTATAAACCTCTACTGAGGTCAAAGATTTCATTCATACGTACAAAATTAGTTTACA
-
fa1_utr3_17_000041853105_000041853360
chr17
41,853,105
41,853,360
utr3
Pelodiscus sinensis
pelSin1
PelSin_1.0/pelSin1
13,735
Trionychidae
reptiles
3
ucsc_multiz100way
JH210964
488,142
488,397
-
514,663
488,269
488,270
1
1
CCCAGGTGCTGTCTCAAGTCCCATTTTAGTATGTCTCTGATGTTTTACCAGTCATTTGCTATAAGTAAATGCTGGCATTTCTACAAtattcagaaacaaaatatttcatacaGAACCATCTTGAAGTAATTTTATGAAAAAAGattgtgcttttatttttatacacAGGTATTCCTCTAACTATTTTATGTGCCTTCAATTTTGGAGAAGCAAGTGCACAGATTCCAAATGTATGCAACTTTCAGCTACTCAGGA
+
fa1_utr3_1_000197156477_000197156732
chr1
197,156,477
197,156,732
utr3
Orientallactaga bullata
Allactaga_bullata
GCA_004027895.1
1,041,416
Dipodidae
mammals
1
zoonomia_cactus
AllBul_scaffold_5854
35,446
35,701
-
110,280
35,573
35,574
1
1
TATACTGACAAAATAAAATATTCTCAATGAATCTAAACTTAGTCATGAGATACAAAATTTTAAGGACCAATATAATATAAGATGATTTTAGAGTTACACAAAGGTCAACTAAAGAGTGTATTCTTCATTTTATACTGTTTGTGCCAACTTCAAAAACATATATACATTCAGTTTGCCCAAACCTATGTTCTTACAGCTTTGGAAATTAGAGGCAGCAGGTTAATTTCTGTGTTATTGTCATTTTGTTTCTAAATT
+
fa1_utr3_20_000003250693_000003250948
chr20
3,250,693
3,250,948
utr3
Pseudopodoces humilis
pseHum1
PseHum1.0/pseHum1
181,119
Paridae
birds
2
ucsc_multiz100way
KB221190
50,656,687
50,656,942
+
51,152,410
50,656,814
50,656,815
1
1
GTTCTGAGCTCTTCTGCTCCAGTTTTTAAGGAACAGCTCAATTTGCACACTCAAACcccaattatttcttttttttgtttgttttttgttcacAGGGCTTGGAATTCCAGCTGGATCAGCCCCATCCATATTGAATTGAGAGCTGCACAAATTGGAGTTCTTAAAAAGAGTTCAGCAGAGCAAAAAATCAGCTACAGCATCTTCATCTATTTTCAATCAATTGCACTTAAATCTACTCTGTATCCACTCACGTGT
+
fa1_utr3_17_000040091481_000040091736
chr17
40,091,481
40,091,736
utr3
Nannospalax galili
Nannospalax_galili
GCF_000622305.1
1,026,970
Spalacidae
mammals
1
zoonomia_cactus
KL199983.1
101,776
102,031
+
541,876
101,903
101,904
1
1
CCCTGTATTCCTCCAGTCCCATGGGTAAACCCTCTCGGCCTTTCCTCCCACACCTGGGGGCCCAGTGGAGTTCCTGATCTGCCTgctgtctccctccttcccctggcCCCACTCTTCCTCTCCATTCCCATTCTCAGCCATAGGCACTTGGgaatcccctccccctccccagtcaCTTGAGCTGTGATCCCCTAGCCTAGGCCCTTCCCCCTACCCTCAGTGGAGTGTATGTGTGAGTTcctctgtgtgaatgta
+
fa1_utr3_10_000060028581_000060028836
chr10
60,028,581
60,028,836
utr3
Panthera onca
Panthera_onca
GCA_004023805.1
9,690
Felidae
mammals
1
zoonomia_cactus
PanOnc_flattened_line_12752
84,445
84,700
-
112,406
84,572
84,573
1
1
GCAGCCTTATTAACCTAATATGACACTGCTAGAATGGTTACAAATGATTGGCTTATTCAAAGGTGTCTACATCTTATAGCCAGTACACAATACAGTAATAATTGTACAGCGTGCTGCCATTCTACGAGCTAAGAATTTCTGTTTAGTCCATTTTAAATACCCCCGACTGGGGCCTCTTATGAGCACCATCCACCTCTAAAGCGGCAAGCATTACCCCCTTTTAAGCACTAACAGCACCCACCCTCCCCCTAAAGC
+
fa1_utr3_9_000072354591_000072354846
chr9
72,354,591
72,354,846
utr3
Tupaia tana
Tupaia_tana
GCA_004365275.1
70,687
Tupaiidae
mammals
1
zoonomia_cactus
TupTan_flattened_line_25997
2,726
2,981
-
21,001
2,853
2,854
1
1
CAGAAAATTGAAAGCAAAACTGAATGCTTTAATAAAAGTAAAAGCTAAGGCTGAACACTGTAATAAATCAGAAGTAGTGCCTCGTGTACATACTCAACTATTCACAGATGAAAACAGGCATTGCCACAACACTAATCTAACCATACTCATTTAGGTATCACAAAACACAATTATCAACAGCATTCTACAAAAACAACTAGAAAAGGGTTCATTTTTAAAAAAATCCACTGACTTCTCTCTACCATACATGTTATT
+
fa1_utr3_12_000051810606_000051810861
chr12
51,810,606
51,810,861
utr3
Geosciurus inauris
Xerus_inauris
GCA_004024805.1
3,371,099
Sciuridae
mammals
1
zoonomia_cactus
XerIna_scaffold_1138
66,293
66,548
-
283,829
66,420
66,421
1
1
CAAAGCAGCTCATTGAGGAAGGAGCAAGAGAAGGTTATGTTGACTTCGAAGTTGTTTTCTGCTCTCACCCTCTGCTTTAAATTATGGACTCTCCTCATCCTAAGCAACAAGGAGGTTAAGGAAAGAAGAGGGGGAAAGTGTTTTTCACACACAAACCAGCAACCATGTCAGCTGCTGCTCAGTGGCTTTGGCTCTGCATTTTAAATTAACAGCATCACACATCTTTTTGCTTTTTGTCCTTTTTTAAAAGGTGGA
-
fa1_utr3_14_000073701167_000073701422
chr14
73,701,167
73,701,422
utr3
Enhydra lutris
Enhydra_lutris
GCF_002288905.1
34,882
Mustelidae
mammals
1
zoonomia_cactus
KZ291767.1
20,176,489
20,176,744
-
33,646,359
20,176,616
20,176,617
1
1
AGAGGGGAACCAGCCAACCAAATTCTGATCCAGCAAATTTAACAAGGGAGTGGGGGAGAATGAACTATTTTGCAGTAGATTTgcactttaaaattataaactggaTGTTGGTGGAAAGTGCTCCCAAAGGGCAGATAGGTAAATACCTAGCCTGCACGTGGATATTGGAGAATCCAACTTCGTCCTTGCTCGTTCTAAGCCCACCTGCGCAGTAGTTGTCTGTTGACATAATCAGAGCCAGGATTTCCCTGTGTC
+
fa1_utr3_11_000002944408_000002944663
chr11
2,944,408
2,944,663
utr3
Alligator mississippiensis
allMis1
allMis0.2/allMis1
8,496
Alligatoridae
reptiles
3
ucsc_multiz100way
JH735916
480,919
481,174
-
1,611,438
481,046
481,047
1
1
GAAATTTTATGGACAAGACAACCATGACTTTTCATGTTTCACAACTTTAATAGAATATTCTAACTATTCTGTACAAATTGAAAACACCGTATTAAGTTACAAATGTGTAAGGTAAGGCTGGAGCACTCTACATGCCTGGTCACAGTGTTGATACAGTTGCTATTCAACTGATGCCAGAGATTGGCATTTGGATGCTCAAACTAGAAATGTGCACCTGAAGTACTGCACAACAACAACAGGTAGTTTTGAAGACTT
+
fa1_utr3_2_000138569185_000138569440
chr2
138,569,185
138,569,440
utr3
Chrysochloris asiatica
Chrysochloris_asiatica
GCA_004027935.1
185,453
Chrysochloridae
mammals
1
zoonomia_cactus
ChrAsi_scaffold_180142
4,168
4,423
+
10,617
4,295
4,296
1
1
ATGGAAGATCCTTTTGAAACTTAATATCTTCAGTTATCAGTATTACTGCATTATGGAGCTAGTGCAATCCTGCATAGCCTTGGTCAAAATGACAAGGCACAATAAAAAATTAAAGTATTATATGAACAAGAGAAGTCACTGAAGATAATTTAAGGCCTTGAAGTGAATTAGAGTACAATCAGTCTAATTTAAAGCTGAAGAATAAACCATAAATTATCCACCCGAAAAGCTAGCAATATGCTTTTTCAGTTTCTG
-
fa1_utr3_3_000047344686_000047344941
chr3
47,344,686
47,344,941
utr3
Hippopotamus amphibius
Hippopotamus_amphibius
GCA_004027065.1
9,833
Hippopotamidae
mammals
1
zoonomia_cactus
HipAmp_scaffold_7960
83,072
83,327
+
137,788
83,199
83,200
1
1
CTAAGCCTGTGATTAAAAAAGTCCTCTGATAGTGGGTGTGAAGACAAACCCCATGAGCACCTTGCTACAGGACTGGTCGAGAGTGCACTGATTCCGGACACGTGGGGGCTCAGAGGGAACCCTGAGTGCCATGCGAGGCCTTAGGACCCTGGGATCCGAATGTGGGAGCGGATACCACCCTTTCCACGTTGGGTGGTTTTCCATTCAAACACAAATTTGCCTTTAGTGTCTTTTATGTTTTCTTCTTGCAAAAAA
-
fa1_utr3_11_000066665487_000066665742
chr11
66,665,487
66,665,742
utr3
Daubentonia madagascariensis
Daubentonia_madagascariensis
GCA_004027145.1
31,869
Daubentoniidae
mammals
1
zoonomia_cactus
ctg156
1,711,945
1,712,200
+
2,394,800
1,712,072
1,712,073
1
1
AAGCAATGGAAACATCCCGGCAAAGGGGACCGCGCGGAGCAAGTTCTCATATATGACCGCAGCCCGAGGGTTCAGTCCGCAATTATCCTACCTGAAAGAGAGCACAACACAAGAGGCTTACACAATGCCTGGAGAGCAGCTTGGCTCCGAGTACAAGGACCCTGGTCTCGTCCTGTATTCCAGGGGGGAAAAAAAAAGAACAGAACAAAACCAAGTCAGACTGGATCAAACTTATATCGCGTGTAATTACCCCTA
+
fa1_utr3_19_000039825457_000039825712
chr19
39,825,457
39,825,712
utr3
Otolemur garnettii
Otolemur_garnettii
GCF_000181295.1
30,611
Galagidae
mammals
1
zoonomia_cactus
GL873752.1
1,281,541
1,281,796
-
2,035,133
1,281,668
1,281,669
1
1
CCCTGCCCCTTTCCTGGGGCCCCTCCTGAAGCCATACCCCCCCATCTGGGGGCCCTGGGCTCCCATCCTCATCTCTCCCCTTGACTGGAATTGCTGCTACCCAGCTGGGGTGGGTGAGGCCTGCACTGAATGGGGCCTGGGGTAGGGGGTCAAGGAGAGGGATTTGGCCGCACCCTCCCCACTAAGGACTGAACCCTTGGCCCCCTCCCcccttgttttctatttattgtacCAAAGACAGTGGTGGTCCGGTGG
-
fa1_utr3_6_000107659082_000107659337
chr6
107,659,082
107,659,337
utr3
Melopsittacus undulatus
melUnd1
WUSTL_v6.3/melUnd1
13,146
Psittaculidae
birds
2
ucsc_multiz100way
JH556631
2,253,010
2,253,265
+
17,573,784
2,253,137
2,253,138
1
1
ATCTGAGGGGAATATTTGCTGGGCGTCACGAAAGACTTGGATGAAATTTCAACCCTGATGGTTTTCAGTGATCCAGGAAGGCAGTGAGACAATCTCTCCATATGCATAGCCCTTTCATGATAATTAGAATGGTATGGACAAACCAATGAAAACAAGGGTAAAGTGAGAAAGATCCCCCATGATTCTGtttcactgtttgctttctcctgtCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGG
+
fa1_utr3_10_000027111603_000027111858
chr10
27,111,603
27,111,858
utr3
Spilogale gracilis
Spilogale_gracilis
GCA_004023965.1
30,551
Mephitidae
mammals
1
zoonomia_cactus
SpiGra_flattened_line_11782
2,995
3,250
-
105,797
3,122
3,123
1
1
gaggtagaagcaggcttcccaccgagcagggaacccaatgtggggttcgatcccaggaccctgggacgatgacctgagctgaaggtagatgcttaacaactgagccacccaggtgccccAAAAAGAGCTGATTTTTAACAGTGGCCATGCTTTGCTTTTTTGTAGCCCTGGAGTCTGCTGCTTGACTCTGGCAATGACCATCTGTGTGGTTCCGGAAACTGTAAGAACAGGAGTGGAGCAGAGTATATGTGAAGT
-
fa1_utr3_5_000109196512_000109196767
chr5
109,196,512
109,196,767
utr3
Myotis lucifugus
Myotis_lucifugus
GCF_000147115.1
59,463
Vespertilionidae
mammals
1
zoonomia_cactus
GL429767.1
15,999,712
15,999,967
-
64,990,205
15,999,839
15,999,840
1
1
TCTGGCTTGTAAGCAAGTCTGAAAATGAATGGGGCTAAATAGATAAAGCAGCCCGTTGTCTTTTACCATTTTTAACTCAGATCTGTATTTaacacttatttatttgttagttttttttttacattcagaaAAAATACACTTTGAACTTTGACTAACATTgtagaatgtttttaaattgttttctacttttttaaaacgTGATTTCATCATTTTTGTAAACATTGATCATTTTTGAATAGTTTTCTTTTCCAATGG
+
fa1_utr3_17_000082033806_000082034061
chr17
82,033,806
82,034,061
utr3
Spilogale gracilis
Spilogale_gracilis
GCA_004023965.1
30,551
Mephitidae
mammals
1
zoonomia_cactus
SpiGra_flattened_line_27764
54,500
54,755
-
55,742
54,627
54,628
1
1
AGCCAGGAAAGAAGTGCACAGTCTTCTAGAGCCTGCTTCGGGAGGGGCAGCCCCGCCCAGCCCCCCCCCCCCGTTTGCTGTCGTGTTGAGATGTCTGGTGTCCCTGAGTTTGCTGTGGGGGAGTGGTGTGGGTGGGGAGGGGGAAGAAGCATGGGGACGAGGCCACCACTCCTGGGGACAGGGCTGGGGCAGTGGGGTCCTGTCTGCTCTGTCTCCTCTCTGGGGTTACAGCTCCGGCTTTACCTGGACCCCATG
+
fa1_utr3_1_000033299151_000033299406
chr1
33,299,151
33,299,406
utr3
Choloepus hoffmanni
Choloepus_hoffmanni
GCA_000164785.2
9,358
Megalonychidae
mammals
1
zoonomia_cactus
KN186322.1
116,469
116,724
-
339,929
116,596
116,597
1
1
TGACCTTCCTGACCTTCCAGAAGGCCTGGGCCACTGAAGCCCTGCCTGGTCTGGCTCCTGGGGCAGCCAGGCCAACTGCAAGATTCTGGACTGTTTTGGTGGCATCCAAAGACGATTCTCAGAGCACTTTGAACCTCTTTGTTGAGTTCTCTTTTTGTTCCCCACCCTTCACtttcttcactgttttttttttttttttaatttgttttggaagaatcaaaaaaaaaaaaaaaagatatttattggCCAAGAAGT
+
fa1_utr3_4_000082425232_000082425487
chr4
82,425,232
82,425,487
utr3
Vicugna pacos
Vicugna_pacos
GCA_000767525.1
30,538
Camelidae
mammals
1
zoonomia_cactus
KN267643.1
855,464
855,719
-
4,534,976
855,591
855,592
1
1
tttaatctttttgaagaTTAAGTGTCTTAACTTAAATGGTTTTTTACAGGAGTTAAAGTACATAAATGCCTTTTTACAGCTTAATCATTTTGGTCTTCTGTTTAGTGTTGTATTTCAATTGTGGAGCCTCATTTTAAGTGTTCATTCTTTAAGATTtaatgcttgctttttctttttatagctaaTAGTGAAATCTACAAACCAAAACAAGAACTTTAAAATCTGGGATATAAATTAAAGATCATATGCACATAG
-
fa1_utr3_20_000050891089_000050891344
chr20
50,891,089
50,891,344
utr3
Kogia breviceps
Kogia_breviceps
GCA_004363705.1
27,615
Physeteridae
mammals
1
zoonomia_cactus
KogBre_flattened_line_1474
61,066
61,321
+
128,440
61,193
61,194
1
1
CAAACATTTTACAGAGGGAAAGAAATGTTGAGAAGGCAGATAAAATAAACCTCTGCTTTTTCTCATGTGCGTTCATGAGCCCCCGACTTACTGGTTTTTCACATTTAGTTACTGTGCCTGTCACAGCACGTTCTAAAGCAAGATCAGCCAATCGTGTGTCATAGACTTAGAAATAACCACTTGGATCGGAGTGGCCGCGTGTCCCCACAGCCTGATGAGCCAGCACTCAAAAGGCAGTACCAGTTCGAATACAGC
+
fa1_utr3_11_000009447091_000009447346
chr11
9,447,091
9,447,346
utr3
Indri indri
Indri_indri
GCA_004363605.1
34,827
Indriidae
mammals
1
zoonomia_cactus
k141_4076336
8,402
8,657
+
9,005
8,529
8,530
1
1
GAAACATTCTCGTCTTCCTTTACCTTTTGTGCCCTAATACCTAGTCTACTTTTTAAATTTTCAGAATTCATTGCTCTTTGAATTGATAATTCCAATTTTCACATTATTGTTATTGGAAAATCATATCTAATAAAGGTTTTAGTTATTCCCATGCACAGTATGAAAATTCTCATTTGAGGTTTTGCTTCAAGAAAATGTATTGGCATGTCTTTGAGAACATGTTTGTCTCTTGTGTCACATAATCCAAGCTAATCT
+
fa1_utr3_8_000018527666_000018527921
chr8
18,527,666
18,527,921
utr3
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_5865
192,908
193,163
+
234,358
193,035
193,036
1
1
GTGCCATATCTCTCTGCAAATTGTGAAAGTAATTAGTGACAAAATAGCAGCCTACTCCTTTTCAGTAGCCAAACTGTCAGCATTAGCAGACTTAGGTAAGCTAGTGGGACTGAATTATGTACTGGAAACCTGTTCCTCCTTATCAGCCACCAGACTGAAGAAATGCCATCTCCATATAAAATTATGGCATTTATGGCAGTCATCTTTGTAATGGAATAGGCGTTTATGTAGGTATTGCTAAGGTGTTTAGAGAAT
-
fa1_utr3_2_000038985343_000038985598
chr2
38,985,343
38,985,598
utr3
Otolemur garnettii
Otolemur_garnettii
GCF_000181295.1
30,611
Galagidae
mammals
1
zoonomia_cactus
GL873560.1
7,438,948
7,439,203
+
14,687,976
7,439,075
7,439,076
1
1
TGAGGCCACAGAAGACATAGTCCACACAGAGAGCTTGGCAGAAGCAAGCATCTGAGTATGAGCCATACCAGCGATGGTCTCTGTCTGGCCTGGTCACCTTTGGTCAAGGTCATCAGGTGCAGGGTGCCCAAAACTAAAGGTATTGCCTCCAAACAAGGGAAGTTTGTGTCACTAAGGTGACAGAAGAACTTTTTAAACACTGTAGCTGTCAAGTATACTATTTACTTGCTGTCAAGTATACTATTTACAGGAGAC
-
fa1_utr3_22_000039130751_000039131006
chr22
39,130,751
39,131,006
utr3
Sus scrofa
Sus_scrofa
GCF_000003025.5
9,823
Suidae
mammals
1
zoonomia_cactus
CM000816.4
6,372,197
6,372,452
-
111,506,441
6,372,324
6,372,325
1
1
TGTTCTGACTACATGAATGTATTCGGGAGGGTTGGGGGCGCGAGTCGGTTCAAGCACATGCCTTTGCTGAGTGCGCGTGTGCAGGGAGAGCTAGAGCGGATGCagagtgtgggtttatttttgtactGATATTGGTAAGAGACTGTACAGCATCTATTTATTTAGATGATTTATCTGGTAAACGAggcaaaaaattattaaaaatacattaaagatgattttaaaaaaacctctcgGGCACTCGATCTTTCCTTG
-
fa1_utr3_14_000063291513_000063291768
chr14
63,291,513
63,291,768
utr3
Indri indri
Indri_indri
GCA_004363605.1
34,827
Indriidae
mammals
1
zoonomia_cactus
k141_4603372
6,854
7,109
-
20,766
6,981
6,982
1
1
GACTAATTTCCAGTTACTCAGGCATTACAAATCCATACCAAATTAGCCTAAAGACGAGCCGTTTTATATCCATTTCTATTTTCAGCATGTTTCTACCAAAGCTATTAGAACCAACACATACCTCTGAATGCCTGATCACAAGAAGACCCAAGAAAACTTTAAGAAATTAACAAAGCCATGATTTTTGGAACCTGGTTGAATGCAAACACCATCTGAATTGGTGCAGGTCCACATTTTTTGCCAAAGATTCACACT
+
fa1_utr3_13_000071438713_000071438968
chr13
71,438,713
71,438,968
utr3
Cavia porcellus
Cavia_porcellus
GCF_000151735.1
10,141
Caviidae
mammals
1
zoonomia_cactus
DS562860.1
50,046,199
50,046,454
-
61,868,410
50,046,326
50,046,327
1
1
AACCGGCTAAACCCATTTTAATACAATTGAAAGGTTATATGTACAGCTCCTATTTTAGCTTGCTTTAAAAGGgggcaatattttttatttaagatattGTTAGTAAATGCTTTGTAGAAATTTGGTTTTCTAAGCATAGCTTTTCCATAACCATCTTTTGTTGAGTACAAGAGATTCTGCTCCTCCTACATTGTGTGTTTGTTGTTTTCTCCTATATGCAGTCTTTAAAGGATTACAACGTTTAAAATTGGATTG
-
fa1_utr3_15_000035519485_000035519740
chr15
35,519,485
35,519,740
utr3
Dasyprocta punctata
Dasyprocta_punctata
GCA_004363535.1
34,846
Dasyproctidae
mammals
1
zoonomia_cactus
DasPun_flattened_line_24534
18,348
18,603
+
57,232
18,475
18,476
1
1
GATGCAACAGTGCCCTCTATAGTCTTTTAGTGAACAGTAAATAGATGTATTTGCTGTGGAATATTCAGGTAAGAAGCAGGATATTTAAATTTAATTTCTGCTCAGACAAAAGACCCTTTTTTCCTAAGTAGACAATCTTGTTTTTCTCTCGGGGCTTTACTTTAAACAAAGGGAACAAAAGACCATTCTGAGTTTTCATTTAGAATTATTGGCTACCTCTTGTTACCCAGTGGTAAATCTCAAGTTTTATCTGAC
-
fa1_utr3_16_000071729235_000071729490
chr16
71,729,235
71,729,490
utr3
Aplodontia rufa
Aplodontia_rufa
GCA_004027875.1
51,342
Aplodontiidae
mammals
1
zoonomia_cactus
AprRuf_scaffold_25877
7,438
7,693
-
52,235
7,565
7,566
1
1
TAATATTTTTACAGTAAAGAAGATGTGATGGGGCTTAATGAAAAGTTTAACTTACAACATGAAAGGAAAAGGGTCTTTTACAGGAACACGGTGGGAATTCACACAGGAAAAAGTTCAGAAGCTGTTTCCCATGAGGTCTTCAAATAAAAACACAAAGCGCAAACGCAGGTTCTTAAAAAAAAAAAAAAAAAAAAAACTCCAATGCTCCATCTTGAAGCCAGAATCGGCCTGGTGGAAGTTTGTGAAGCAACTCAC
+
fa1_utr3_8_000093924674_000093924929
chr8
93,924,674
93,924,929
utr3
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_14603
60,933
61,188
-
92,450
61,060
61,061
1
1
TGTTGAGACCAGGGAGGGAGGTTTTGTTTTTCCTCCATGTAGCCATAGGTCAGTTAAAATACTTGGTTTAAAAATCACTAAATGCTTTAAACATATTGTAGCTTATAAATAGGAATCTTAAGATATATACGTGAGACATTTTAAAAGGCAACTGTGGTGCATGCCTGATGCTTAATAGAACACTTAGTAGCATCAAGTGTCATATGCGGCAGTCCCTGTAATTAATGCAGTCCCTTCTAATGCTGTATCAAAATA
+
fa1_utr3_4_000091600954_000091601209
chr4
91,600,954
91,601,209
utr3
Nesogale talazaci
Microgale_talazaci
GCA_004026705.1
2,583,312
Tenrecidae
mammals
1
zoonomia_cactus
MicTal_scaffold_8992
38,842
39,097
+
124,435
38,969
38,970
1
1
AAGAAATGTTAGGAAAATAGTAAAATCATGATGACTAATTGTGGAAGTTAGCTTGATTTTCCCTGAAAGTTGATGTGTGTTGCAATCGTATCTAAAATATGTAAATAAATGAGCATGATAACATAATCAAGGATTTTTTTCCCAGGATATGGAAATACTGTGTATCACAAATAATGTTTTGATTTAAACCTTTGGAGTTTATAGCTTTGTTTTTCTGCAAAATAGACTTGGATTATGCTTTGTAAAAATAATCTA
+
fa1_utr3_8_000041654095_000041654350
chr8
41,654,095
41,654,350
utr3
Erinaceus europaeus
Erinaceus_europaeus
GCF_000296755.1
9,365
Erinaceidae
mammals
1
zoonomia_cactus
JH835474.1
3,755,764
3,756,019
-
3,992,674
3,755,891
3,755,892
1
1
GAGGCCCGGGGCTGGGCTGGAAACCCGCCTCGGCTAAGCCCCAGTCTGGGGCAGCAAGGAAACTGCTGGCTGGCTGTTCTTCGCCTCGGTGCCATCAGGGAAGAGCCTTAAAGTTACACTAGAGCCTCCGGCGGAGGGAGGCCCGAATCAGCACAATCCTGGCGCCGCCCTGCCGGACGGGCACCCCCTTCGGGCCAACAGAAGGACTACTGCTAGGCTCTTCTACTCGCACGGGAGCCTGGGGGGGCGGAAGTC
-
fa1_utr3_17_000048070927_000048071182
chr17
48,070,927
48,071,182
utr3
Lycaon pictus
Lycaon_pictus
GCA_001887905.1
9,622
Canidae
mammals
1
zoonomia_cactus
CM007573.1
24,364,272
24,364,527
+
61,073,796
24,364,399
24,364,400
1
1
AGGCAAAGGGCCTTCCATGAAGGACAGAACTTGCAGAATGGGTGTGTGGGAGAGCAAAAGATACTGTAGATCTTCAAAGTGCATCTCCACAACCCACAGCCTTCTTCCCAATAGTGTTAACTCTGCATTTTTACAGCGTAGCATGTGtgtagtttttggctattactgGTGTAtcatttgggggtgggagggttgggggtgggaaggaacGGAGATGGGTAGgatcatttttgttaaaatttgggGCCTGATTGG
-
fa1_utr3_8_000058582229_000058582484
chr8
58,582,229
58,582,484
utr3
Odobenus rosmarus
Odobenus_rosmarus
GCF_000321225.1
9,707
Odobenidae
mammals
1
zoonomia_cactus
KB229069.1
3,156,211
3,156,466
+
3,180,472
3,156,338
3,156,339
1
1
AACTAAGCAGCTATGCTATAGCTCAGTATGTACCATTAAATTGTTCTGGGTCAGTGTACATTTCAGTTTAACATAGAACTGCATTTTGGGTTTTAGAAAGGCAGCAATAGttatattttggcttttattctagATGCTTAACAGTTAAGGCGACAGTTGAAGCATATTAAGTAAAGGCAGTTAAAATTAAACTATGATCAACACAATCTCTTGCAACCTACATACACTGTATAATGCTTACGTGGAATGAAACCA
-
fa1_utr3_4_000015067765_000015068020
chr4
15,067,765
15,068,020
utr3
Daubentonia madagascariensis
Daubentonia_madagascariensis
GCA_004027145.1
31,869
Daubentoniidae
mammals
1
zoonomia_cactus
ctg31
11,114,165
11,114,420
+
18,626,795
11,114,292
11,114,293
1
1
TTTGACCTGTGTATATTGGGGTCTTCTGTCTAAACTGGGGTCACTGTTGCATGGAACATTGTTGTTCTTAATGGTTAAGAATTGCTTTTTTAAATTTTGATGAAGGAATTTTGGTAATGACTTTGCTTGCAGGTTTTTTTATTTTTCTTTTTGAGAAAGTGGCATGGAAACATGCAATAGTTAATGAGTTTCTCTTGGTACTGAACACTATTAGAATATCATTAGTAATATTTTTTCTCTTTAGAGCATTTTTAA
+
fa1_utr3_1_000109498796_000109499051
chr1
109,498,796
109,499,051
utr3
Aplodontia rufa
Aplodontia_rufa
GCA_004027875.1
51,342
Aplodontiidae
mammals
1
zoonomia_cactus
AprRuf_scaffold_18154
14,445
14,700
+
65,474
14,572
14,573
1
1
TGCCCTTTTGCCCTTGTTCCTTCACTAGAGAAAGCTGCTAGTAGTCAGCCTATTTTGCTTTTTCAAAGAAAAGCCAGGGTGCTCAGATTTAAAAAATAAAAAAATTGCCTGTCATTTGCACAAATTTCCATATTGGGTTCACTAAGTCCTGATTCCATGTTTGATTGTGTTCCAAGTTTGATTATATTCAGACTCAACCTTGAGGACATTAGAAATATACATGGTTTATATCCAAAAGCAAATGATAGTGGAATT
+
fa1_utr3_1_000167424619_000167424874
chr1
167,424,619
167,424,874
utr3
Anas platyrhynchos
anaPla1
BGI_duck_1.0/anaPla1
8,839
Anatidae
birds
2
ucsc_multiz100way
KB742931
932,134
932,389
-
4,102,838
932,261
932,262
1
1
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcggggggctggggggctgcctgcgggctggggaagggcagcgcagccctgtcccgcgggctggggaggggggcgGATATTCACAGACTGATCAAGAGGACCCCTTGTAACCAAAGGAAATAAGATACGATTGCAATTTGCCCTCACTTTGCAGTAGCTTTTAAGCAGCGACATTCAGAGGCGTAAGGGGGTCGCTCCCCGGGCTGCAGGTCACGGGGTGCTAT
-
fa1_utr3_4_000013569357_000013569612
chr4
13,569,357
13,569,612
utr3
Melopsittacus undulatus
melUnd1
WUSTL_v6.3/melUnd1
13,146
Psittaculidae
birds
2
ucsc_multiz100way
JH556594
3,922,613
3,922,868
-
12,630,573
3,922,740
3,922,741
1
1
GGTCCCTTTCACTATGCTAAACTACACTTTAATGCATGCGAGAAAAATACTTTACCAACTGTCAGCGCAGATTTAAGAGAACTTCAGGTTCTAGACAGCCTTGGGGGAGTGGAGGGGAAGTCTCCTACTGACGTCTGCAtagaatgtaaaatatataattaaaaaaacctaagGTATATACTAAAGTTTACAGACCAATGCTTTccatataataaataaaatgttcatCGTCGATTAGATTCATACACAGAGTAA
+
fa1_utr3_11_000095976961_000095977216
chr11
95,976,961
95,977,216
utr3
Ceratotherium simum
Ceratotherium_simum
GCF_000283155.1
9,807
Rhinocerotidae
mammals
1
zoonomia_cactus
JH767744.1
25,142,669
25,142,924
-
30,314,786
25,142,796
25,142,797
1
1
CTATCAAAAGgttatattttatacaaaaagtAAATTGTTACCTTTTGTATGCTAATATACAAAGTTTTGTATAATATGATGGTTTATTTTTAGCTCTACACTTAAACCATAGGAGGTCAAGTGGGAACTTTTGAAAACTATCAAGAGGCTTGTTAGACAAATTTATACTCTGAAACCTCAATAAGAAAGCATTCCAGGTTTCaatcctttccctttttttttctttctgctcccaaATTCTTGTTTAAGCCCATA
-
fa1_utr3_18_000076969468_000076969723
chr18
76,969,468
76,969,723
utr3
Enhydra lutris
Enhydra_lutris
GCF_002288905.1
34,882
Mustelidae
mammals
1
zoonomia_cactus
KZ291783.1
2,488,896
2,489,151
-
20,753,235
2,489,023
2,489,024
1
1
ACAAAGTCCatacaatatttataataaaactgcTCTCTTCTGAAACCAGGGAGGCCATGAGACAAAATAAAGGCaattatttttcaagagaaaaacaaaagcaaaacaagccCCCCTTCATGTTGCAGTGAACAAGGTACCCATTTGTGACTCTGATGAGCACAGCTCTGGCCTGCCGTGCTCGTGGGGAGTCGGACTCTGACGCGCTCTCTCTGCCGTCAGGACGAGCGCTGCTATTTACAAAATATACCGTTC
-
fa1_utr3_18_000055223188_000055223443
chr18
55,223,188
55,223,443
utr3
Tadarida brasiliensis
Tadarida_brasiliensis
GCA_004025005.1
9,438
Molossidae
mammals
1
zoonomia_cactus
TadBra_scaffold_614456
261
516
+
829
388
389
1
1
TTATTTCATTTCATTTTGCATTGTCCATATAGTTCTGATTTTCTGTAAGTAAAACCACATCGATATTTCATTTTCCAAGTGTTGGAGGTATTGACAGCTTAACAAACAAAACATACCAAAAAAAAAAAAAAAATCACAAAAACAAATTGAAAAGCAAAGCACATGATTGACCAAGGAAGAGATGCCCTTAATGAAAATGGAACAAGATGCATGCAAAACAAAAAGGAAACTGTCTAGAGGATTAACTAATGGAAG
-
fa1_utr3_6_000043287017_000043287272
chr6
43,287,017
43,287,272
utr3
Alligator mississippiensis
allMis1
allMis0.2/allMis1
8,496
Alligatoridae
reptiles
3
ucsc_multiz100way
JH736338
1,060,581
1,060,836
-
1,169,602
1,060,708
1,060,709
1
1
CTCCACATATAGGTGCCAGCAGGCCCTGGGCATGCGGACGGACACCTCGGGGTGCTGTATCCTGCTTCCAGGCACCAAGGTGCAGTGCCGAGACCTGCCCAGGGCAGGATGAGGCCCCTTGGTGCCCCCAATGAGGTTGCATGCCAAGAGCTGTACAAATGGCAGTGCCGTGACCACATGCTCTGCCTTGCCGGGCGGCTCCGAGTGCAGCTCCCGGCTGCTTGGATGCAGGCACAGGCAGGGCCACTGGCGGGA
-
fa1_utr3_4_000157365624_000157365879
chr4
157,365,624
157,365,879
utr3
Tupaia tana
Tupaia_tana
GCA_004365275.1
70,687
Tupaiidae
mammals
1
zoonomia_cactus
TupTan_flattened_line_552
6,751
7,006
+
64,691
6,878
6,879
1
1
CGCAGCCGCAGGCAGTAGCCCGTTCATACCCATGTCACGGTGCGTCCGTACCTTGCTCTGTCAGTGTGTCTGTGTGCAAATAAGTGAGAAGCAGTCCAACGCAAGTGCTGACAGCCGCCTCCAGGTTTTTTATCCGTTTTATATAAAAACTGTTATGGAAAGACCAAAATGTTTATGAACTATTCTTATGTAAATTTACAGCTGTCCTCTACTGTACCTTTTTGTTTACAGTATAGACCTGATTTTCTGCTGTGT
+
fa1_utr3_16_000004257165_000004257420
chr16
4,257,165
4,257,420
utr3
Noctilio leporinus
Noctilio_leporinus
GCA_004026585.1
94,963
Noctilionidae
mammals
1
zoonomia_cactus
NocLep_scaffold_7716
39,102
39,357
+
152,488
39,229
39,230
1
1
ctgcctctctcccttcccctctttctaaaaaaataatgaaataaaatctaaaaaaaaaaaaaaggcatGGTGGCCTTGGTTCCCCACCCTCCGCTTTCTTAACAAAATATAATAGCTCTCCTTGAACATAAGACCTCAAAACTATTTAAAAACAAACAAACAAACAAAAAACCCAACAAAACAAAAAGAGAGAGACAAAGACATTTTTGAGGGTCGAAGATAGGAAACCTGGAGGGAGAGATGGGGACCAGCTGG
+
fa1_utr3_12_000053415825_000053416080
chr12
53,415,825
53,416,080
utr3
Tupaia tana
Tupaia_tana
GCA_004365275.1
70,687
Tupaiidae
mammals
1
zoonomia_cactus
TupTan_flattened_line_116409
7,926
8,181
+
9,343
8,053
8,054
1
1
GTTAAGAGACAGAAATAAACATGTTTTAGGCACCAGAGATTGAAGCACCACCCCTCCCTCCCCCAACCCCCAGAAAGATGGACTAGGGAAGAGGAAGCAGGCTCTGGGGTATACACAGATGGGGGTATCCTCAGGTCATACTTTTCCCAAAGTCTTTGTGCCTTAGACTCTAGGTAAGGGCTATGGGATGTTACTAGGAGAAAGGGATGATCAGAAATGTGAAGACTGCTCTGTCCACACTGTTCAAGAGCAGTT
-
fa1_utr3_X_000050367816_000050368071
chrX
50,367,816
50,368,071
utr3
Myotis lucifugus
Myotis_lucifugus
GCF_000147115.1
59,463
Vespertilionidae
mammals
1
zoonomia_cactus
GL429963.1
1,636,605
1,636,860
+
2,558,624
1,636,732
1,636,733
1
1
TGGCCTGGCTCAGAATTTTAAAGAAGCGTCAGAATCAGCTGGGCTATAAGTATGTCCCAGCCACTTCAAAGACGCTGAAAATGCACCAAAAGATTGGAAGTTCCACCAAGAAGTCGGGCAGTTGGtagaggtatgtgtgtgtgtgtgcgtgtgcgtttgtgtAGGGTAATGGGGGTGGGTGATGGGATTAGGGTGGGGAGGGATTCCTGGGTTAGCACAATAAATTATAGGGTCACTTAGAGGTCGAGTTGTATT
+
fa1_utr3_4_000107910786_000107911041
chr4
107,910,786
107,911,041
utr3
Anoura caudifer
Anoura_caudifer
GCA_004027475.1
27,642
Phyllostomidae
mammals
1
zoonomia_cactus
AnoCau_scaffold_856
434,388
434,643
-
489,669
434,515
434,516
1
1
TACTCACAACCCTTGAGGCTCCCCCTCACTAACAGGCCTAATGCTAAAACCCACTCTCAGCATTGGGTTATTCTATTTACACAGTAGCTGTATCTGTCCAGAGAGTTTATTTAAAACATTAACAAATTCTTCCGACCTTGGAGGGGAAAAAAATCCTGAAAAAATTCTTTAGTGGAGGAGACTAAGGAAAGGCATAATGTGTTCTTTGGCACCTCTTTGACAAGCGCGCTAGTCAAATCCCAGGTGGAGGGCTTG
-
fa1_utr3_1_000116988480_000116988735
chr1
116,988,480
116,988,735
utr3
Mirounga angustirostris
Mirounga_angustirostris
GCA_004023865.1
9,716
Phocidae
mammals
1
zoonomia_cactus
MirAng_flattened_line_12680
36,480
36,735
+
88,210
36,607
36,608
1
1
ACTCATGCCCTGCATTGCAATCCTCTGTGCTTTTATCCTGGCTCTGACGAATCTAACACTGCTCTGTCTTCCGAAGGGAAAAAAGATTCGTTTGTTTTGAGCAATAAAGTCCTACAAAATGATGGCCATTCATGTGCGGCTCTTTGTCACAATGGGCCGGACGAGCCACACTCCCCCTCGGCTCACCATTGTCCCCTCCACTTCCCTCACTGTGCTGCCGACAGTCCGTTCTGCCCTTGTCACCGAGTCTCCCCT
+
fa1_utr3_11_000014457441_000014457696
chr11
14,457,441
14,457,696
utr3
Columba livia
colLiv1
Cliv_1.0/colLiv1
8,932
Columbidae
birds
2
ucsc_multiz100way
KB375313
4,963,593
4,963,848
-
13,020,934
4,963,720
4,963,721
1
1
AAACACTTAAGCTATTACACACTCCCATCTTCTTAGACTACCAAAATACCCCACCAGATATTCAATACTGATCAAATAATACAGAGTTTATAATTTACAGACAAAACAGTACTGGCATAATTTGTTTATTGTACTGTGAGCATCAGTATATAttagagacaaagaaaacatgacttccagtacaaagaaaaaaacctggagATTTAAAATGTTGCTCAGTATCAATCATGGAGAACCTATAAATTATCTGCTGGA
+
fa1_utr3_11_000077660628_000077660883
chr11
77,660,628
77,660,883
utr3
Mus musculus
Mus_musculus
GCF_000001635.26
10,090
Muridae
mammals
1
zoonomia_cactus
chr7
97,691,936
97,692,191
-
145,441,459
97,692,063
97,692,064
1
1
AATCCAAGACATGTTCTGATTAGGTGCTTCCTGGAACTTAGTTACTACTTTAAAATTGAAGTGAGATTCTAAGATAAGACAATTTACAAACTCTTAGCTGGAATTTATACTCTTCACATTGAAACTCACGGCCCCTAAGCTTCTAAATGGATAGAAATAGCAAAGAAAATTATGTTCCAAATTAGTAGCCAGCAGATGAAGGTTACTTAGAAATTGTCACATTTAGATAAACCTAATTACTTATAAGAATACAGT
+
fa1_utr3_10_000119831085_000119831340
chr10
119,831,085
119,831,340
utr3
Giraffa tippelskirchi
Giraffa_tippelskirchi
GCA_001651235.1
439,328
Giraffidae
mammals
1
zoonomia_cactus
LVKQ01S003014.1
110,613
110,868
-
131,805
110,740
110,741
1
1
TGGTAACATCtaaagtttatataatatttagtaaGGGCTTTTACCTTACTGATTTTATGGagcttttgaattttgttttataattatataaattagtaACAATgtacaaaaatgtatttgatattaaaaatttaatattgataATGTTGCTGATATACCATTTCCTTAGTTTCCTTAGCTTCAGCTAAGTCATAGGCCAGACTCTGTTGAAATAGGAAATGTGAACATCATTTGAAGAAAACTGTTGCAATTCCA
-
fa1_utr3_14_000092061475_000092061730
chr14
92,061,475
92,061,730
utr3
Myrmecophaga tridactyla
Myrmecophaga_tridactyla
GCA_004026745.1
71,006
Myrmecophagidae
mammals
1
zoonomia_cactus
MyrTri_scaffold_29609
28,333
28,588
-
55,540
28,460
28,461
1
1
GCTGTGCACAGCATGTCAGGAGCTGCCATTTAACTGGAAACTCCCTGTAAGAAAGTCAGGTACTACTTAATTCACAGCAGCTGTCCTGCTAAGCACTTAAAATGATTTCCATTCTGTTTTACCAATTGGGAAAACCTTAATGTTTAATATTTAAACTATTGGTATTGTTTTTCTAATGTACAATTAGTATTAACAGAATATGTACAATGGTGATAACAGTGTTACAAGTAAAATTTAAACAAGCTTTGGAAATAC
-
fa1_utr3_21_000034791620_000034791875
chr21
34,791,620
34,791,875
utr3
Hippopotamus amphibius
Hippopotamus_amphibius
GCA_004027065.1
9,833
Hippopotamidae
mammals
1
zoonomia_cactus
HipAmp_scaffold_4086
38,014
38,269
+
185,121
38,141
38,142
1
1
GCTGTCCGCTCCACCACCCCGTGGACGCGTTGTAAGGCAAACAGGAAGATTCCCAGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAGATTTTATACCCTTGACTTCACTTTTTAACCAAGTTGTTTATTCCAAAGAGTATGGAATTTGGGGGTTGTTTTTTTTTGGGGGGGGGAGATGCAACTCATTCTGTTTGGCGTCTAATTCATGTTTTTAATTTTCTTTTCCAGCACCTTAT
-
fa1_utr3_X_000100294439_000100294694
chrX
100,294,439
100,294,694
utr3
Octodon degus
Octodon_degus
GCF_000260255.1
10,160
Octodontidae
mammals
1
zoonomia_cactus
JH651686.1
2,099,772
2,100,027
+
6,305,026
2,099,899
2,099,900
1
1
CCCCCTCCCTCAATGCCCTTTCCCattccataaaagaaaatattcctagtATATGTATAAATCTAGGAACTCAagcaaaaataactaaaacattgAAAAGAGCTGACTTTATCCAGctaaacttaagaaaataaattctcttttgCATTCTAGTGCTCTAACCTCTAGACCTTCCTTTTGGGTACCcttagatttcaaaaaaaaaaaaaaacaactgtgaaGAAAAGCACAAAACCTGCTCTCTAGAAACAACTT
+
fa1_utr3_8_000091959303_000091959558
chr8
91,959,303
91,959,558
utr3
Moschus moschiferus
Moschus_moschiferus
GCA_004024705.1
68,415
Moschidae
mammals
1
zoonomia_cactus
MosMos_scaffold_7351
34,556
34,811
+
106,998
34,683
34,684
1
1
TTGCTCTGTGGAACCTTGCAAAAGTGAAGAAACGTTGAGGGTTGTTTAGAGCAGCTGGCTGGTGTCAAAGCTGCCAGGATGCTAATAACTGCAGGCTGAGTCTCTTACTTCTGTGTGTGTGTGTATATATACTTATATATATATATATATAAAGGAGCCTTTTGTGTTATGGCATTTTTTTCTTGCTGTTGTGTTCACATATCCCACTGCAAAATCATCTTTCATTTTTCCTTCTGTTGACCTGGATATTATTAT
+
fa1_utr3_X_000124376394_000124376649
chrX
124,376,394
124,376,649
utr3
Muscardinus avellanarius
Muscardinus_avellanarius
GCA_004027005.1
39,082
Gliridae
mammals
1
zoonomia_cactus
MusAve_scaffold_38984
1,913
2,168
+
39,918
2,040
2,041
1
1
TGTGAAAGCTATTAAGGACCAAATATATTACTATATATAAGAAGAAATTACTTTCTGAACAGTAACTGAGAATACTTAGCGTTAAACTTGCTGTGGATTTTTGTCTTGGCAGTTGTCACCTTACATTATTTGTCAACGGAAGTGTGTTTGGCAATTAAAAATCTTTCCTTAGATTTAGTGGTGGACTTTAACCTCTTAAATAACTGTTAGTATATCAGATTGTGTCATTGAAAATATTTTACTTGTATGAATCAT
-
fa1_utr3_12_000069270990_000069271245
chr12
69,270,990
69,271,245
utr3
Equus caballus
Equus_caballus
GCF_000002305.2
9,796
Equidae
mammals
1
zoonomia_cactus
CM000382.2
84,202,885
84,203,140
+
84,719,076
84,203,012
84,203,013
1
1
TCCCCAGATGTTATGTCATGTGCAGCTGTGAGAGCCTGCCGGAGATTGCCCCTGCAGCTCTGCACGTTCATCTTGTCCATGGTCAGGCTTGTTCTTACAAAACCAGCTGTTTCCAATTATTCATATAATTGCcagttttattttacaatgtatTGTTATTGGAGTATTTGTGCATGGGACCATTGATATTGATCAGAACTGCTTGCTCTCAGAAATTTCAGTGTTCTATCTTGTTGAAAATGCAGTTGCCTTTTT
+
fa1_utr3_14_000069460490_000069460745
chr14
69,460,490
69,460,745
utr3
Myrmecophaga tridactyla
Myrmecophaga_tridactyla
GCA_004026745.1
71,006
Myrmecophagidae
mammals
1
zoonomia_cactus
MyrTri_scaffold_9262
21,922
22,177
+
101,266
22,049
22,050
1
1
GTCCAGAGGGGAAGGCAAATTTGGAAGTTAGATGGTTCAGTCCTTGCAGAGTTCAAGGCTCTACCCAGTAAGATTTTCTAGCCAGACTTTTAAGCGTGATGGCAAGGCACTGCTGAAAGAGGCTTTGGCCAGCAGAACTAATTTGTGACCACTGTACACATGACATAGTAGTATCCAAACCAAACCAGACACTAAAATGCGCTATTTATTTGACAAAGTGAGTTTTCAAGGAGAATCAAGGCAACCACGTAATTT
-
fa1_utr3_15_000023366519_000023366774
chr15
23,366,519
23,366,774
utr3
Orientallactaga bullata
Allactaga_bullata
GCA_004027895.1
1,041,416
Dipodidae
mammals
1
zoonomia_cactus
AllBul_scaffold_10450
55,970
56,225
-
85,975
56,097
56,098
1
1
CAATTTAAAATGTTTACAAACTGCAGTGCAATCTACTGTTAGTGAAATGTCTAAGTCAAGATAAATGCATATGTAATCACCAAGTCCTCACAGAAAAGTAAAATGTGCTTTTATACTTCTGAGGTTAGGTCAGAAGCATATTTTGTGCAATATTATGTTAATGTGCCTATATATTATGAATAAATTATTTTAGTTGTACATTGCTTAAATCAAGAATTTTTCAATGTTTGAGTAAGAACCATCAGTTTAGCTATA
+
fa1_utr3_20_000034713100_000034713355
chr20
34,713,100
34,713,355
utr3
Zalophus californianus
Zalophus_californianus
GCA_004024565.1
9,704
Otariidae
mammals
1
zoonomia_cactus
ZalCal_flattened_line_7394
36,632
36,887
-
167,266
36,759
36,760
1
1
CCTGTTATACACATACACAGGCATGCCACATGACTGGATCGAGGTGGTTGTGTCCTTGAGTCTGTCAACATGTCACAACATGATCAACCACAGTCTTCTCATTTCAGCCGGTCTCAACACAAAACACCTATGAGGGATACACTCAACTTGTTGGTTCCATATGGAACTAGGTGGCAAGGCAAAAGGGAAGATACAAGGGGCTCCGATGTGTCTGCATTCAGTCCCCTCACATAAAGCCACATGGATCTGAGAAGG
-
fa1_utr3_2_000080648105_000080648360
chr2
80,648,105
80,648,360
utr3
Lipotes vexillifer
Lipotes_vexillifer
GCF_000442215.1
118,797
Lipotidae
mammals
1
zoonomia_cactus
KE557723.1
398,965
399,220
-
731,531
399,092
399,093
1
1
TTAAATTGCTCAATTTGTGGGTCACACACTTAAGCGTATTGGCTAGTACACTTTTGCactgaaacagaagcaatacaaGCTTTATGTTCTACCATTACACTTCCAGATTTTTCGCTTATTAATATACCTGCCAACTTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTTATTTTCCCCATCCCTCCCACTCCCATAAACATTGCAATGTGAACTCTTTGCCCAATTTTACTAGAATGTTGC
-
fa1_utr3_6_000143940663_000143940918
chr6
143,940,663
143,940,918
utr3
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_31366
5,569
5,824
+
44,284
5,696
5,697
1
1
GCCATAGCCAACCTATAGTTTTACAGAAACAATTTCTTGTGGAATAATAGATGTCTCCATTTTAAAAAAGCATTTTAAATGTAGTTTGAATATTTTCCACAGGATGCTACAATGTGAGTTATCACTTCATTTATCTTAAAAGACTAAACTGATTGTCAGTTACATCTGACAGAAAACAAAAAAAAAAATCACTGTGTAACCAGGTTAAGTGGTAAAATAATCCAGGCGTCAGTCAAAAAAAGCATTTTACTGACT
-
fa1_utr3_2_000200980225_000200980480
chr2
200,980,225
200,980,480
utr3
Columba livia
colLiv1
Cliv_1.0/colLiv1
8,932
Columbidae
birds
2
ucsc_multiz100way
KB375802
185,391
185,646
+
722,956
185,518
185,519
1
1
ATGCCACATGTCTTCCCCTCCAGGACACAGGGTCATTCTGCTGATAGACTAACATTGAGACACCACCACGCTGTGGAAGCAGCTTGGTTTGTAAGCGGGAGGGAAACGCCGCTTTCCCAGGAATTAACGGCTAGCCCCGCTctagttttgttgttgttcttatgAGCTGCTGATCACTGAATTGAAAGGTGTGTTTGGGTCAAGAGTATTTTTCAGGCTGCTTTCTACAGTATCTTGGCTGTTGGACACCTCTGC
-
fa1_utr3_17_000049828759_000049829014
chr17
49,828,759
49,829,014
utr3
Anoura caudifer
Anoura_caudifer
GCA_004027475.1
27,642
Phyllostomidae
mammals
1
zoonomia_cactus
AnoCau_scaffold_2722
145,932
146,187
+
310,749
146,059
146,060
1
1
ATGTATGACATGTCACCCTTCCCAACTTGGTCGCCTCCAACACTGCTGTCTTCATGTGGAGCCCTCGCCACAGTCCCAACTCTGGTCATTTGTGCCTTTCTCTAGTCATCTCTGTACACTACCCGCACTCCCTGTGGGGTGGGGGAAGCTCGTTTTAAGCATGTTCCGTGGCAGCTCCCTGCCAGTTTCAGTGTCATTTAAAACTTATCCAAAAGCAACTTCACTGGGGGTTTTCTTAAGGGGTAAAGGCCTTTT
+
fa1_utr3_16_000023067657_000023067912
chr16
23,067,657
23,067,912
utr3
Dasypus novemcinctus
Dasypus_novemcinctus
GCF_000208655.1
9,361
Dasypodidae
mammals
1
zoonomia_cactus
JH568272.1
491,728
491,983
+
586,843
491,855
491,856
1
1
taagtgtgtgtgtgaagaGAATTCAATTGCAAATTGTTAAAATGCGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGTATTGATACCAAGCTAACTGGAATAACTGTAGATGATTCCCTGGACAGTCCCTTTAATAATTGTACATATTTCTTTCTAGAGAACTCTAATGACTTTTGTCGGACACTAGGGTTTTGAAACCTGTGATCCAGTCACGCTATCATTAGTGTGGTCTGTAGGAGGAT
-
fa1_utr3_8_000144331952_000144332207
chr8
144,331,952
144,332,207
utr3
Geosciurus inauris
Xerus_inauris
GCA_004024805.1
3,371,099
Sciuridae
mammals
1
zoonomia_cactus
XerIna_scaffold_32283
27,191
27,446
+
44,268
27,318
27,319
1
1
CCGAACCCCTGTCCTTCCCGCCGAAGCCCGGGACTTGAGATGTCCAGGATCACTTATTCCGCCTCTGAGCCGGGACCCTAGCTGGGCTCTGCCTCCTGGGAGCCGAGGACCCCGCCTCCCAGAGGCCGAACCCTCATCCGAGGCCCGGGCCCATCCCCACTCAGTTGCCAACTTTCGCCGGTCTATGCCAAAGCCTCGGCGGCGACCCTGCTCAAGGGCCCGCCCCATTGGCCGCCGCCTTTGTGACGTCACTGC
-
fa1_utr3_10_000073235261_000073235516
chr10
73,235,261
73,235,516
utr3
Castor canadensis
Castor_canadensis
GCA_004027675.1
51,338
Castoridae
mammals
1
zoonomia_cactus
CasCan_scaffold_53454
7,447
7,702
+
29,125
7,574
7,575
1
1
GGAATTTTACTGACAATAAGGGGCAAGAATCAGAATTTCAACAAAATATACTTAGAATGCTATTTTTATTATTACAACTTCAACTTTTATTCTTGGAGTTAAACCACTAGATAAAATCTTAAGTGTGTTAAATTCTAGTACTTTTCCCTAGTTCTTTCCCCAACTATCAAGAATAGGAAACATGTCACTTTACCAAAAATGACTGAGTTGTGTTGGGCCTGGAGAAGAAGTCAGGTAAAAGGAGCGGGTCTTTGG
-
fa1_utr3_3_000064003120_000064003375
chr3
64,003,120
64,003,375
utr3
Tupaia tana
Tupaia_tana
GCA_004365275.1
70,687
Tupaiidae
mammals
1
zoonomia_cactus
TupTan_flattened_line_40165
334
589
-
17,272
461
462
1
1
GTGCAAAACATTTTCCATTTTCGGATCATTTAAATGAGCACTACATACTGTCAGTGTGAATGTAGGGCTTTGAAAGCATTTTGCTGTTTTTTTTTTTTTTTTTTTTTTTGAGCTTGGTTATAAAAGCAATCTCCTTTGTTAAAATGTGTGAATAGTTCAATAATTTGTACACATAATCAAGAGCATCTCAGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAGAAAATTACTTTG
+
fa1_utr3_18_000021523310_000021523565
chr18
21,523,310
21,523,565
utr3
Orientallactaga bullata
Allactaga_bullata
GCA_004027895.1
1,041,416
Dipodidae
mammals
1
zoonomia_cactus
AllBul_scaffold_183887
1,269
1,524
+
4,071
1,396
1,397
1
1
TAGAATGTAGAAGATATTTGTATTTAAAAAAAAAAAGTAGCTTTGTCTTTCTCTGTGCAGTGTTAGTTTAAGATTTATAATCTTATATGTATTGAAACTTTTGGCAAAATTTCCACAGGAGTTAAAAGTTTACTATTTAAACTGAACAAAACAAAATCCGTAAATGCAGAGCAGGCCTTGTGTGCATTGCTGAAGCTTCTCTTGCTGACTTCCTTTGCTTCTCCCATTCTTTCAAAAAACAGGTCCCCCCCCCCC
+
fa1_utr3_6_000108987104_000108987359
chr6
108,987,104
108,987,359
utr3
Gallus gallus
galGal4
Gallus_gallus-4.0/galGal4
9,031
Phasianidae
birds
2
ucsc_multiz100way
chr3
66,555,879
66,556,134
-
110,447,801
66,556,006
66,556,007
1
1
TGGCAGTTGAAAAGACGGGGCTGTGCCGAAGCGCTGCCCGCTGGGGGTGGTTTGGCTTCAGCCAGCACGGGACGCTCTATGGACTTGTGGCAATATCGCAAACCATGGCTGTATAGATCTTGTAAGGCAAACGCAACAGGAGTTGGAGCGTGAAAGGAAGTGGGACTTGATGACATTTGCTTTCCCTACGagaataattttagaaaatcttGATGCTGCTATTTGTGCTGGTGGAGCAAACAGAGAGGCTGTTCC
-
fa1_utr3_14_000088185202_000088185457
chr14
88,185,202
88,185,457
utr3
Dasypus novemcinctus
Dasypus_novemcinctus
GCF_000208655.1
9,361
Dasypodidae
mammals
1
zoonomia_cactus
JH575011.1
4,106,666
4,106,921
+
4,412,554
4,106,793
4,106,794
1
1
CGTGCCTTAAACAGACTTTTCGTTAGTCCGAAATTACATAGCATTGAGGGATATATTTCACTGTGCCATAAATGACTGAAAGCTTGCTCTGCCAAAAGGAATCGAGGCACTTCGCTTCAGACAACAGCTGCAGGACACGCAGGGGGCGTTCGCACACGTGGGAGGTTTCCACCGCACATGCTAAGGCAGTGTCCGTGGCTGATGCCGTGCAGCCGTGCAGTGCCGCCCGGGCCTGGCACTCGTAAAGGGCAGCTA
-
fa1_utr3_8_000042405439_000042405694
chr8
42,405,439
42,405,694
utr3
Tadarida brasiliensis
Tadarida_brasiliensis
GCA_004025005.1
9,438
Molossidae
mammals
1
zoonomia_cactus
TadBra_scaffold_33800
18,906
19,161
+
35,017
19,033
19,034
1
1
CACCCCTGGGAGCTCACTTACAATCCCACCAGGAGCTACTGCCCAGCTTAGCCAGCCTACCTTTTGGATGGGCCCAACCTCTCTGGACTTTGGGACAGAGAGGGTCATAGCTCTTCAGAAGAACAAAAAGTTTCACTCCTGACATTTCATAAAGTAAACGTAAGGCCCAAACACACTGGCTTCATTCTCTTCCTCTCCAGAGATGTTTCTGTTGTCCTACTAGTGCTTGTGGAACCAGCTGGACTCACGCCAAGA
-
fa1_utr3_12_000094305262_000094305517
chr12
94,305,262
94,305,517
utr3
Platanista gangetica
Platanista_gangetica
GCA_054084255.1
118,798
Platanistidae
mammals
1
zoonomia_cactus
PlaMin_flattened_line_177129
6,606
6,861
-
7,372
6,733
6,734
1
1
GCTGTGACAACCACTCCAACTCTATGTACAGAAGCGCTCCCACAGTACACAAACAGGCACAGTGCTTGGTATGCTTTCTAAAAGCTGTGCATGTGCCTTGCTCTCTTACGACAGTGCTCAAAGTGGAACCTATGTGCAAACTTAAAAAATTAACGACACAGAGTAGCTTAAGCAGCCATTTTGCTCCCAAGTCGTCTGAAGAACTTTACCAGATTAAGCCAGGCCCCAGAGTGCTTACTTATATCCACTTGCATT
-
fa1_utr3_1_000065414666_000065414921
chr1
65,414,666
65,414,921
utr3
Cricetomys gambianus
Cricetomys_gambianus
GCA_004027575.1
10,085
Nesomyidae
mammals
1
zoonomia_cactus
CriGam_scaffold_15241
56,507
56,762
+
78,908
56,634
56,635
1
1
ATGTGAACCTCTCAAAAATGCTCTTTTAAAATAGAGGTAACCATAGAAACCAAGGTATTATTTATTAATGTATTAGAAAATAACACTTGACCCAGTGTGTGCTTGCCTTATTTAAAATTGTGCTCTgggcctggagagactgctcggcagcaaagagcttgtgctgctcttgtagaggctctgagttcaggtcccagcacccacgtcaaacagctctatagctgcctatagctccagctccaggggatgtgatgA
+
fa1_utr3_18_000072537937_000072538192
chr18
72,537,937
72,538,192
utr3
Craseonycteris thonglongyai
Craseonycteris_thonglongyai
GCA_004027555.1
208,972
Craseonycteridae
mammals
1
zoonomia_cactus
CraTho_scaffold_1939
114,061
114,316
+
114,668
114,188
114,189
1
1
CGGTCGTTTCATTTCTCCTGAAGACCTTGTCGCCTAACACCCATCAGAGGCCAGGTTCCCGAGGGACGGTCAGTATTCAAAGAAAACACTGGAGATGTGGGAGGGAATCGTTCTTTGACCGCCGCAGCCTGACGCAGGTTGGAGAGAAGCTGGCCGGCTCCGCCAAGTCCACGGCGATCGGAGGGCGCATTCCGGGGCCCCGATGGGGGCTTGCCCGCCGGGCCGGGCCTCTGTGTCTATAGAGGGAACACCAAG
+
fa1_utr3_10_000068377940_000068378195
chr10
68,377,940
68,378,195
utr3
Geosciurus inauris
Xerus_inauris
GCA_004024805.1
3,371,099
Sciuridae
mammals
1
zoonomia_cactus
XerIna_scaffold_78354
2,061
2,316
+
9,015
2,188
2,189
1
1
ATTAAGTTATCTCTAAGTTTAATTCAAATTAAAATATTAAGGCAGTGGGAGTGGACCCAAGCTCTTCTCTAAGGATACAGAAAGTGAAATAAAAGTGAGAGTGAGGTAGGCCTTGAAGTTGTGCTATCACAGAAGAGGGCTTGAGGGAACTGGAAAACTGAAATGCTAAAGCATAGGGTGATGGCCAACCTGGGTTATAAACTATTTTAAAAATCAGTAAGGGAGCCATTAGGCAAAGAGTGGGCCAATGGGGGA
+
fa1_utr3_18_000046266295_000046266550
chr18
46,266,295
46,266,550
utr3
Alligator mississippiensis
allMis1
allMis0.2/allMis1
8,496
Alligatoridae
reptiles
3
ucsc_multiz100way
JH732977
727,934
728,189
-
791,622
728,061
728,062
1
1
GTGATTGTGGTTTTCAGATCAATACCCTTTAAAATTTGTTAAAAGAGTCAAAGAAATATGTAGTGTCTTAAATAAAAGAAAACCGGCATCAGGCTAAAATACGTGATTTGTTTAAACAAACACAGTGCACAATTGGAGGAAGTTTAGTTAGGACGCAGTCATTTTTATATACACATGGAAGTCACATCATATACAAACTGAAAACAGAATTAGTTTGCATTTTTTTTTAATGGAAGGACTATGAATAGGTCCCTG
-
fa1_utr3_21_000025769849_000025770104
chr21
25,769,849
25,770,104
utr3
Odocoileus virginianus
Odocoileus_virginianus
GCA_002102435.1
9,874
Cervidae
mammals
1
zoonomia_cactus
KZ100570.1
564,417
564,672
+
591,854
564,544
564,545
1
1
taattaatttttttttaaaaaggagccaTAAGAAACCAAACTaaaccaaaattttatttctgcttgaggtatactttttcagatttttaaatctctgaCAGGAAAAACAGAGATCATCTGAGAACTTTTGTAATGGTTGGTTTATTAGGATTTAATGTCTCtcttataataatttaaattcttGGCCTGACATTATGAAAAatctatacagtaaatccttaaaATTGGCTTTTGAGTAAAGCCAGATTTAAACCT
-
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marin-dna/functional-utr3

Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and official version-matched UCSC hg38-to-target liftOver chains. This draft covers the utr3 region cohort with all species scope and preserves source FASTA/2bit letter case.

Non-human rows project only the central human nucleotide and extract the 255 bp target window centered on its unique mapped locus.

For the 28 non-mammalian targets, the stable ucsc_multiz100way alignment_source value identifies the pinned UCSC assembly cohort; the actual projection operation uses the matching checksum-pinned pairwise liftOver chain.

Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.

Produced by the commit-pinned vertebrate projection pipeline.

Human anchor provenance

Human anchors were constructed on GRCh38 from the complete Ensembl release 115 GTF with all qualifying transcripts; RefSeq and canonical-transcript-only filtering were not used. The enhancer input is ENCODE SCREEN Registry V4 dELS/pELS. The five disjoint classes use the base-priority order cds > utr3 > tss_region > ncrna > enhancer followed by the source-arm window-majority gate. The shared projection catalog requires at least 10% human bases above the pinned phyloP cutoff; this initial training dataset contains only the nested at-least-20% catalog. Projected 10–20% rows are excluded and retained as a separate producer artifact.

Coordinates and sequence semantics

Human source coordinates use GRCh38/hg38 primary chromosomes. All human and target coordinates are 0-based and half-open. Every emitted sequence is exactly 255 bases, preserves its source FASTA/2bit letter case, and is oriented to the human anchor.

The published format is zstd-compressed JSON Lines under data/train/ and data/validation/. The release is validated before upload against a producer-keyed manifest of file sizes and SHA-256 checksums, and the immutable Hub revision exposes each large-file SHA-256 identifier.

license: other preserves the source-specific terms of the public genome assemblies, annotations, and alignments rather than relicensing those inputs.

Splits

  • train: 11,364,040 rows after removing the validation sample and applying the configured reverse-complement augmentation.
  • validation: 16,384 original-orientation rows sampled uniformly without replacement with seed 517 before augmentation (4,194,304 tokens including BOS).

The split is row-level and does not stratify by chromosome, species, or human anchor. Different species projections from one human anchor may occur on opposite sides of the split. The reverse complement of a selected validation row is excluded from training.

The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.

Projection backend Clade Selected species
ucsc_multiz100way amphibians 1
ucsc_multiz100way birds 11
ucsc_multiz100way jawless_vertebrates 1
ucsc_multiz100way lobe-finned_fish 1
ucsc_multiz100way ray-finned_fish 9
ucsc_multiz100way reptiles 5
zoonomia_cactus mammals 107

Schema

  • query_name: String
  • source_chrom: String
  • source_start: Int64
  • source_end: Int64
  • region_label: String
  • species: String
  • alignment_name: String
  • assembly: String
  • taxonomy_id: Int64
  • family: String
  • clade: String
  • phylogenetic_rank: Int64
  • alignment_source: String
  • t_chrom: String
  • t_start: Int64
  • t_end: Int64
  • t_strand: String
  • t_src_size: Int64
  • pre_resize_t_start: Int64
  • pre_resize_t_end: Int64
  • fragment_count: Int64
  • aligned_bases: Int64
  • sequence: String
  • augmentation: String

Intended use and limitations

This dataset is intended for genomic language-model research and is not a clinical resource. Assembly quality, alignment gaps, repeat masking, family-deduplicated species selection, human conservation selection, and the center-nucleotide acceptance contract affect the observed sequence distribution. Projecting the center nucleotide does not establish that both 127 bp target flanks are homologous to the full human anchor.

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